##########################
Visualisation Capabilities
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We use `Plotly <https://plot.ly/python/>`_ as our backend for visualisation. It provides excellent graph interactivity in Jupyter notebooks.

**********
Alignments
**********

.. toctree::
    :maxdepth: 1

    dotplot
    dotplot-annotated
    display-gaps-per-seq
    draw-alignment-coevolution
    draw-alignment-info-plot
    draw-seqlogo


*****
Trees
*****

.. toctree::
    :maxdepth: 1

    draw-tree-square
    draw-tree-support
    draw-tree-angular
    draw-tree-circular
    draw-tree-radial